After a few more days of tests I'd like to clear up my last message.
I do still get mass kicks without battleye filters, they are just not as frequent.
As you guys have said its clearly not the cause of the problem, just me shooting myself in the foot with the amount of filters I had.

My server has mass kicks very frequently, so tonight I tried running it without any BE filters. We lasted 4 hrs 15 mins with 70+ players and no issues, then I turned the filters on and within 40 minutes a mass kick occurred.

All servers do it but I have had the issue on a couple of Australian servers as well as my local server.

It wouldn't be including the headless clients. Run a server without and it still counts incorrectly. It is actually just displaying listed players * 3

The issue only occurs when linking the editor module to a unit in the module's settings. if you leave owner empty and link a unit to the module in game the issue doesn't occur.

I looked at this again cause my servers need zeus and I discovered something.

I have done a bunch of testing using other zeus setups that I have put together as well as official zeus missions.

Aww, is there anything else you could get from me that may help with this? I am not the only person who experiences the issue but I am not sure what else I can provide. All variables are set correctly and I am 100% certain its to do with disableAI because with that tiny mission i attached where there is nothing but the zeus modules and disabledAI the issue occured for me.

I have tried to replicate the issue using a few of the "Escape from..." missions that you guys have made and had no luck. I am unsure if that is because your missions are flawless or when I DC to work my way up the netIDs an AI takes over the unit and therefore it doesnt change netID when I rejoin.