I haven't tested it but I think it might be your head going into backpack or other clothing/equipment. I had this bug too but my screen went completely black. I had a mountain backpack equipped and I think I saw my head clipping into it before it went black.
This happened when going prone. No problems when crouching or standing.
Edit: similiar issue in http://feedback.dayzgame.com/view.php?id=1764 but with motorcycle helmet.