I am unable to reload missiles from the pilot seat (and manual fire active) after rearming the blackfoot. On top of that the flares do not get replaced in the pilot seat (HUD still shows zero flares). In the gunner seat all missles reload normally and also the new flares magazine is loaded. In the pilot seat I do have "reload" in the action menu + the icon on the screen, but it does nothing.
Unless I am doing something wrong with scripting this seems to be a bug.