When in game playing as team leader you can order your AI to move in a predefined numbered position on a multi floor building and the AI will do just fine .
When in the editor you can use the command "this move (mb buildingpos 5);" to make a unit move to the predefined position number 5 in the building near the marker , here named "mb".
The AI will follow the command but it will ignore the "height" aspect of it and will move to the exact position but on the ground floor.